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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925112.1_cds_XP_016473383.1_65513
CDS Infomation

[gene=LOC107795287] [db_xref=GeneID:107795287] [protein=pentatricopeptide repeat-containing protein At5g12100, mitochondrial-like] [partial=5'] [protein_id=XP_016473383.1] [location=<5..1048] [gbkey=CDS]
Sequence

TTCACGAGGTGTTTTGAGATTCTTGAGGAGATGGAAGATAATGGATTGAAGCCTAATGTA
ATTACATATGGTTCGCTAATCAATTCTTTGTGCAAGGATGGTAGGCTTCTTGAAGCTGAT
GTAGTCCTTAATGATATGATCAGTAGAGGGGTTAAACCAAATGCACAGGTCTATAATATG
CTTATAGATGGACATTGTATGAGAGGAACGATGAGTAATGCTTTTGTATGTTTCGAGAAG
ATGGTAGAAAGTGATATAGAAACAACACTGGTTACATACAATACTCTATTAAATGGGCTT
TGCAAAAAGGGTATGATCAAAGAAGCCGAGGATTTGGTTGTGCATATTCTACTCAAAGGT
TTAAATCCAGATGTTATCACGTACAATTCTTTAATGTCTGCATATTCAAATGCAGGGGAC
ACTGGAAAGTGTTTCCAAATGTATGAGAAGATGAAAACCTCTGGCATAAAACCTACAATG
AACACAATTCATCCTCTTATTAGAGTGTGCAAAAAGGAAAAGAGTGAACTGGTGCTAGTC
GACAAAATTGTTCAAGAAATGGCCGAGATGGATCTTTCTCCCGACCGAGTGGTATATAAC
GAGCTCATCCATTGCTATGCACTGCATGGAGAGGTTCAAAAGGCAGTTGCCATGCACGTA
GAGATGGTGGAACGAGGAATTCCTTCTGACAAGAAGACGTACAATAGCTTGGTTATGGTG
CATTTGAAAGAGGGAAAATGTGAAGAAGCCAAGAATCTCGTCGATCAGATGAAGGCTAAC
AATATTGTTCCCAATGATGAAACTTATAATATTCTGATTGAAGGGCATTGCAAACTTAAA
GATTTTCTTGGCGCTTACATGTGGTACAGAGAGATGCTTGACAATGGTCTTCTCCTGGCA
GCCAATATCTGTAATGAGCTAGTATCTGGCCTTAGAGAGGAAGGAAGATTGCAAGAGGCA
CAAATTATATGCTCTGAAATGAGTTCTAAAGGAATTGAAGAGTGCAATACAAATGAGGAT
CTTTCTGCTGTTGGGAGAGCGTAG

Peptide Sequence

PEP ID

XP_016473383.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g12100, mitochondrial-like, partial [Nicotiana tabacum]
Sequence

FTRCFEILEEMEDNGLKPNVITYGSLINSLCKDGRLLEADVVLNDMISRGVKPNAQVYNM
LIDGHCMRGTMSNAFVCFEKMVESDIETTLVTYNTLLNGLCKKGMIKEAEDLVVHILLKG
LNPDVITYNSLMSAYSNAGDTGKCFQMYEKMKTSGIKPTMNTIHPLIRVCKKEKSELVLV
DKIVQEMAEMDLSPDRVVYNELIHCYALHGEVQKAVAMHVEMVERGIPSDKKTYNSLVMV
HLKEGKCEEAKNLVDQMKANNIVPNDETYNILIEGHCKLKDFLGAYMWYREMLDNGLLLA
ANICNELVSGLREEGRLQEAQIICSEMSSKGIEECNTNEDLSAVGRA

Transcript Sequence

Gene sequence data has not been registered.